-
Recent Posts
- Identifying the best PCR enzyme for library amplification in NGS
- Whole genome sequencing identifies associations for nonsyndromic sagittal craniosynostosis with the intergenic region of BMP2 and noncoding RNA gene LINC01428
- Mature microRNA-binding protein QKI promotes microRNA-mediated gene silencing
- In vitro size-selection of short circulating tumor DNA fragments from late-stage lung cancer patients enhance the detection of mutations and aneuploidies
- The haplotype-resolved T2T carnation (Dianthus caryophyllus) genome reveal the correlation between genome architecture and gene expression
Tags
10x Genomics ABRF agbt Amplicon ASHG ASMS BluePippin ChIP-Seq ddRADseq DNA Sequencing Featured genotyping High Pass HiSeq HLA HLS HLS-CATCH Illumina ILMN Ion Torrent isoseq Mate-pair Sequencing Methods microRNA miRNA miRNA isolation MiSeq ONT oxford nanopore PacBio PAG Paired-end Sequencing PippinHT Pippin Prep Pippin System podcast Protein Mass Spec Protein Size Fractionation proteomics RAD-seq RNA-seq RNA sequencing SageELF SageHLS Tips and ApplicationsRecent Comments
- Alex on And Now, a Word from Our Customer Service Department
- Donna on And Now, a Word from Our Customer Service Department
- Tony Gill on And Now, a Word from Our Customer Service Department
- Alex on And Now, a Word from Our Customer Service Department
- Andrea on And Now, a Word from Our Customer Service Department
Archives
- April 2024
- February 2024
- January 2024
- December 2023
- August 2023
- June 2023
- March 2023
- February 2023
- January 2023
- November 2022
- September 2022
- April 2022
- January 2022
- September 2021
- July 2021
- June 2021
- May 2021
- February 2021
- January 2021
- November 2020
- October 2020
- July 2020
- May 2020
- April 2020
- March 2020
- February 2020
- January 2020
- November 2019
- August 2019
- July 2019
- June 2019
- May 2019
- April 2019
- March 2019
- February 2019
- January 2019
- December 2018
- October 2018
- September 2018
- May 2018
- April 2018
- March 2018
- February 2018
- January 2018
- December 2017
- November 2017
- October 2017
- September 2017
- August 2017
- July 2017
- June 2017
- May 2017
- April 2017
- March 2017
- February 2017
- January 2017
- December 2016
- November 2016
- October 2016
- September 2016
- August 2016
- July 2016
- June 2016
- May 2016
- April 2016
- March 2016
- February 2016
- January 2016
- December 2015
- November 2015
- October 2015
- September 2015
- August 2015
- July 2015
- June 2015
- May 2015
- April 2015
- March 2015
- February 2015
- January 2015
- December 2014
- November 2014
- October 2014
- September 2014
- August 2014
- July 2014
- June 2014
- May 2014
- April 2014
- March 2014
- February 2014
- January 2014
- December 2013
- November 2013
- October 2013
- September 2013
- August 2013
- July 2013
- June 2013
- May 2013
- April 2013
- March 2013
- February 2013
- January 2013
- December 2012
- November 2012
- October 2012
- September 2012
- August 2012
- July 2012
- June 2012
- May 2012
- April 2012
- March 2012
- February 2012
- December 2011
- October 2011
- September 2011
- June 2011
- February 2011
- November 2010
- October 2010
- August 2010
Tag Archives: Illumina
Genome Editing Shows Potential for Shrinking Repeat Expansions
Several diseases, many of them involving neurological symptoms, have been linked to expansions of trinucleotide repeat sequences. These repeat expansion disorders include Fragile X syndrome, Huntington’s disease, and various forms of epilepsy and ataxia. In Fragile X, for example, a … more »
Posted in Blog
Tagged DNA Sequencing, Illumina, Pippin Prep
Comments Off on Genome Editing Shows Potential for Shrinking Repeat Expansions
Quality control of next-generation sequencing data without a reference
May 2014 Authors: Urmi H Trivedi, Timothée Cézard, Stephen Bridgett, Anna Montazam, Jenna Nichols, Mark Blaxter, and Karim Gharbi Info: In this paper published in Frontiers in Genetics, scientists at the University of Edinburgh show that it is possible to … more »
Posted in Citation
Tagged BluePippin, DNA Sequencing, Illumina
Comments Off on Quality control of next-generation sequencing data without a reference
Highly Specific Contractions of a Single CAG/CTG Trinucleotide Repeat by TALEN in Yeast
April 2014 Authors: Guy-Franck Richard, David Viterbo, Varun Khanna, Valentine Mosbach, Lauriane Castelain, and Bernard Dujon Info: Researchers in France used a TALEN to introduce a double-strand break in a CAG/CCTG repeat in yeast cells, finding that doing so deleted … more »
Posted in Citation
Tagged DNA Sequencing, Illumina, Pippin Prep
Comments Off on Highly Specific Contractions of a Single CAG/CTG Trinucleotide Repeat by TALEN in Yeast
The emerging biofuel crop Camelina sativa retains a highly undifferentiated hexaploid genome structure
April 2014 Authors: Sateesh Kagale, Chushin Koh, John Nixon, Venkatesh Bollina, Wayne E. Clarke, Reetu Tuteja, Charles Spillane, Stephen J. Robinson, Matthew G. Links, Carling Clarke, Erin E. Higgins, Terry Huebert, Andrew G. Sharpe & Isobel A.P. Parkin Info: Scientists … more »
Posted in Citation
Tagged DNA Sequencing, Illumina, Pippin Prep
Comments Off on The emerging biofuel crop Camelina sativa retains a highly undifferentiated hexaploid genome structure
A first genetic map of date palm (Phoenix dactylifera) reveals long-range genome structure conservation in the palms
April 2014 Authors: Lisa S Mathew, Manuel Spannagl, Ameena Al-Malki, Binu George, Maria F Torres, Eman K Al-Dous, Eman K Al-Azwani, Emad Hussein, Sweety Mathew, Klaus FX Mayer, Yasmin Ali Mohamoud, Karsten Suhre and Joel A Malek Info: The first … more »
Posted in Citation
Tagged DNA Sequencing, genotyping, Illumina, Pippin Prep
Comments Off on A first genetic map of date palm (Phoenix dactylifera) reveals long-range genome structure conservation in the palms
DNA methylation is required for the control of stem cell differentiation in the small intestine
March 2014 Authors: Karyn L. Sheaffer, Rinho Kim, Reina Aoki, Ellen N. Elliott, Jonathan Schug, Lukas Burger, Dirk Schubeler, and Klaus H. Kaestner Info: Scientists in Switzerland and Pennsylvania sought to understand the role of methylation in stem cell-directed regeneration … more »
Posted in Citation
Tagged DNA Sequencing, Illumina, Pippin Prep
Comments Off on DNA methylation is required for the control of stem cell differentiation in the small intestine
SASI-Seq: sample assurance Spike-Ins, and highly differentiating 384 barcoding for Illumina sequencing
February 2014 Authors: Michael A Quail, Miriam Smith, David Jackson, Steven Leonard, Thomas Skelly, Harold P Swerdlow, Yong Gu, and Peter Ellis Info: In this paper, scientists from the Wellcome Trust Sanger Institute and Frederick National Laboratory for Cancer Research … more »
Posted in Citation
Tagged Illumina, Pippin Prep
Comments Off on SASI-Seq: sample assurance Spike-Ins, and highly differentiating 384 barcoding for Illumina sequencing
Glutamine methylation in histone H2A is an RNA-polymerase-I-dedicated modification
January 2014 Authors: Peter Tessarz, Helena Santos-Rosa, Sam C. Robson, Kathrine B. Sylvestersen, Christopher J. Nelson1, Michael L. Nielsen and Tony Kouzarides Info: The authors describe a new class of histone modification, methylation of glutamine, occurring on yeast histone H2A. … more »
Posted in Citation
Tagged ChIP-Seq, Illumina, MiSeq, Pippin Prep
Comments Off on Glutamine methylation in histone H2A is an RNA-polymerase-I-dedicated modification
Variant calling in low-coverage whole genome sequencing of a Native American population sample
January 2014 Authors: Chris Bizon, Michael Spiegel, Scott A Chasse, Ian R Gizer, Yun Li, Ewa P Malc, Piotr A Mieczkowski, Josh K Sailsbery, Xiaoshu Wang, Cindy L Ehlers and Kirk C Wilhelmsen Info: Scientists from the University of North … more »
Posted in Citation
Tagged genotyping, Illumina, Pippin Prep
Comments Off on Variant calling in low-coverage whole genome sequencing of a Native American population sample
Improved Protocols for Illumina Sequencing
October 2013 Authors: Iraad F. Bronner, Michael A. Quail, Daniel J. Turner, and Harold Swerdlow Info: A comprehensive overview of the state-of-the state of Illumina sequencing, from the Wellcome Trust Sanger Institute and Oxford Nanopore Technologies. The value of narrow … more »
Posted in Citation
Tagged DNA Sequencing, Featured, Illumina, Pippin Prep, Pippin System
Comments Off on Improved Protocols for Illumina Sequencing