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Tag Archives: DNA Sequencing
A draft genome of the brown alga, Cladosiphon okamuranus, S-strain: a platform for future studies of ‘mozuku’ biology
August 2016 Authors: Koki Nishitsuji, Asuka Arimoto, Kenji Iwai, Yusuke Sudo, Kanako Hisata, Manabu Fujie, Nana Arakaki, Tetsuo Kushiro, Teruko Konishi, Chuya Shinzato, Noriyuki Satoh and Eiichi Shoguchi Info: Scientists from Japan sequenced the genome of Cladosiphon okamuranus, an edible … more »
Posted in Citation
Tagged BluePippin, DNA Sequencing, HiSeq, Illumina, MiSeq
Comments Off on A draft genome of the brown alga, Cladosiphon okamuranus, S-strain: a platform for future studies of ‘mozuku’ biology
DSBCapture: in situ capture and sequencing of DNA breaks
August 2016 Authors: Stefanie V Lensing, Giovanni Marsico, Robert Hänsel-Hertsch, Enid Y Lam, David Tannahill & Shankar Balasubramanian Info: Scientists at Cancer Research UK developed and validated a new sequencing-based protocol to spot double-stranded DNA breaks in situ; these regions … more »
Posted in Citation
Tagged BluePippin, DNA Sequencing, Illumina, Methods, NextSeq
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Comparative genomics and transcriptomics of Pichia pastoris
August 2016 Authors: Kerry R. Love, Kartik A. Shah, Charles A. Whittaker, Jie Wu, M. Catherine Bartlett, Duanduan Ma, Rachel L. Leeson, Margaret Priest, Jonathan Borowsky, Sarah K. Young and J. Christopher Love Info: To provide a foundation for engineering … more »
Posted in Citation
Tagged DNA Sequencing, HiSeq, Illumina, Pippin Prep
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Comparison of Sample Preparation Methods Used for the Next-Generation Sequencing of Mycobacterium tuberculosis
February 2016 Authors: Andrea D. Tyler, Sara Christianson, Natalie C. Knox, Philip Mabon, Joyce Wolfe, Gary Van Domselaar, Morag R. Graham, and Meenu K. Sharma Info: In this PLoS One publication, scientists in Manitoba compare the quality of libraries constructed … more »
Posted in Citation
Tagged BluePippin, DNA Sequencing, Illumina, MiSeq
Comments Off on Comparison of Sample Preparation Methods Used for the Next-Generation Sequencing of Mycobacterium tuberculosis
Sage Science Launches High-Throughput DNA Sizing Platform for NGS Workflow
BEVERLY, Mass. — November 11, 2014 — Sage Science, a developer of life science products for improving sample preparation processes in molecular biology applications, today introduced the PippinHT, a high-throughput version of the popular Pippin line of automated DNA size … more »
Posted in News, News, Press Release
Tagged DNA Sequencing, PippinHT
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Proteomics & Long-Read Sequencing, Together in Baltimore
Next week we’ll be heading south to Baltimore, home of the Orioles and Ravens, for two special events: the annual conference of the American Society for Mass Spectrometry and the Pacific Biosciences user group meeting. The 62nd annual ASMS, to … more »
Posted in Blog
Tagged ASMS, BluePippin, DNA Sequencing, Mass Spec, PacBio, proteomics, SageELF
Comments Off on Proteomics & Long-Read Sequencing, Together in Baltimore
Genome Editing Shows Potential for Shrinking Repeat Expansions
Several diseases, many of them involving neurological symptoms, have been linked to expansions of trinucleotide repeat sequences. These repeat expansion disorders include Fragile X syndrome, Huntington’s disease, and various forms of epilepsy and ataxia. In Fragile X, for example, a … more »
Posted in Blog
Tagged DNA Sequencing, Illumina, Pippin Prep
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Quality control of next-generation sequencing data without a reference
May 2014 Authors: Urmi H Trivedi, Timothée Cézard, Stephen Bridgett, Anna Montazam, Jenna Nichols, Mark Blaxter, and Karim Gharbi Info: In this paper published in Frontiers in Genetics, scientists at the University of Edinburgh show that it is possible to … more »
Posted in Citation
Tagged BluePippin, DNA Sequencing, Illumina
Comments Off on Quality control of next-generation sequencing data without a reference
Highly Specific Contractions of a Single CAG/CTG Trinucleotide Repeat by TALEN in Yeast
April 2014 Authors: Guy-Franck Richard, David Viterbo, Varun Khanna, Valentine Mosbach, Lauriane Castelain, and Bernard Dujon Info: Researchers in France used a TALEN to introduce a double-strand break in a CAG/CCTG repeat in yeast cells, finding that doing so deleted … more »
Posted in Citation
Tagged DNA Sequencing, Illumina, Pippin Prep
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The emerging biofuel crop Camelina sativa retains a highly undifferentiated hexaploid genome structure
April 2014 Authors: Sateesh Kagale, Chushin Koh, John Nixon, Venkatesh Bollina, Wayne E. Clarke, Reetu Tuteja, Charles Spillane, Stephen J. Robinson, Matthew G. Links, Carling Clarke, Erin E. Higgins, Terry Huebert, Andrew G. Sharpe & Isobel A.P. Parkin Info: Scientists … more »
Posted in Citation
Tagged DNA Sequencing, Illumina, Pippin Prep
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