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Category Archives: Citation
Metagenomic survey of the taxonomic and functional microbial communities of seawater and sea ice from the Canadian Arctic
February 2017 Authors: Etienne Yergeau, Christine Michel, Julien Tremblay, Andrea Niemi, Thomas L. King, Joanne Wyglinski, Kenneth Lee, and Charles W. Greera Info: Scientists from Canada and Australia studied how climate change may be affecting microbial communities by performing metagenomic … more »
Posted in Citation
Tagged PGM, Pippin Prep
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Two stable variants of Burkholderia pseudomallei strain MSHR5848 express broadly divergent in vitro phenotypes associated with their virulence differences
February 2017 Authors: A. A. Shea, R. C. Bernhards, C. K. Cote, C. J. Chase, et al. Info: Scientists from the United States Army Medical Research Institute of Infectious Diseases compared two strains of Burkholderia pseudomallei to find variants that … more »
Posted in Citation
Tagged BluePippin, PacBio
Comments Off on Two stable variants of Burkholderia pseudomallei strain MSHR5848 express broadly divergent in vitro phenotypes associated with their virulence differences
Detection of individual ploidy levels with genotyping‐by‐sequencing (GBS) analysis
February 2017 Authors: Zachariah Gompert, Karen E. Mock Info: Utah State University researchers developed a statistical approach to detect low-level ploidy variants using genotyping data from a sequencing workflow. The method does not require prior ploidy information to function. An … more »
Posted in Citation
Tagged BluePippin
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Rapid genetic and morphologic divergence between captive and wild populations of the endangered Leon Springs pupfish, Cyprinodon bovinus
February 2017 Authors: Andrew N. Black, Heidi A. Seears, Christopher M. Hollenbeck, and Paul B. Samollow Info: Scientists studied members of two remaining populations of the endangered Leon Springs pupfish, one in a desert spring and the other in captivity. … more »
Posted in Citation
Tagged BluePippin
Comments Off on Rapid genetic and morphologic divergence between captive and wild populations of the endangered Leon Springs pupfish, Cyprinodon bovinus
De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis)
February 2017 Authors: Si Lok, Tara A. Paton, Zhuozhi Wang, Gaganjot Kaur, et al. Info: Researchers in Toronto report a high-quality draft assembly of the 2.7 Gb beaver genome using SMRT Sequencing. They include an analysis of gene content, such … more »
Posted in Citation
Tagged BluePippin, PacBio
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Complete genome sequence of Lutibacter profundi LP1Tisolated from an Arctic deep-sea hydrothermal vent system
January 2017 Authors: Juliane Wissuwa, Sven Le Moine Bauer, Ida Helene Steen, and Runar Stokke Info: Scientists from the University of Bergen used PacBio sequencing to produce a complete genome assembly for Lutibacter profundi LP1T, an extremophile isolated from a … more »
Posted in Citation
Tagged BluePippin, PacBio
Comments Off on Complete genome sequence of Lutibacter profundi LP1Tisolated from an Arctic deep-sea hydrothermal vent system
Antibiotic discovery throughout the Small World Initiative: A molecular strategy to identify biosynthetic gene clusters involved in antagonistic activity
January 2017 Authors: Elizabeth Davis, Tyler Sloan, Krista Aurelius, Angela Barbour, et al. Info: Through a citizen science program, college students analyzed 77 soil-derived bacteria to promote genetic characterization and antibiotic discovery for the fight against drug-resistant pathogens. They chose … more »
Posted in Citation
Tagged BluePippin, PacBio
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Genomic and transcriptomic resources for assassin flies including the complete genome sequence of Proctacanthus coquilletti (Insecta: Diptera: Asilidae) and 16 representative transcriptomes
January 2017 Authors: Rebecca B. Dikow, Paul B. Frandsen, Mauren Turcatel, and Torsten Dikow Info: Researchers at the Smithsonian Institution published a high-quality draft genome, 16 transcriptomes, and a time-calibrated phylogeny for the assassin fly. They also include bioinformatics tools … more »
Posted in Citation
Tagged BluePippin, Illumina, RNA-seq
Comments Off on Genomic and transcriptomic resources for assassin flies including the complete genome sequence of Proctacanthus coquilletti (Insecta: Diptera: Asilidae) and 16 representative transcriptomes
Pharmacologic activation of estrogen receptor β increases mitochondrial function, energy expenditure, and brown adipose tissue
January 2017 Authors: Suriyan Ponnusamy, Quynh T. Tran, Innocence Harvey, Heather S. Smallwood, et al. Info: Scientists in Memphis, Tenn., studied obesity in mice, finding that estrogen receptor β and its ligands had a strong anti-obesity effect, reducing weight gain … more »
Posted in Citation
Tagged Pippin Prep, Proton
Comments Off on Pharmacologic activation of estrogen receptor β increases mitochondrial function, energy expenditure, and brown adipose tissue
Genomics-Based Marker Discovery and Diagnostic Assay Development for Wheat Blast
January 2017 Authors: Michael L. Pieck, Amy Ruck, Mark L. Farman, Gary L. Peterson, James P. Stack, Barbara Valent, and Kerry F. Pedley Info: Plant researchers published this look at Magnaporthe oryzae Triticum pathotype, the pathogen responsible for wheat blast … more »
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Tagged Pippin Prep
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