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Tag Archives: RNA sequencing
Association of MicroRNAs with Antibody Response to Mycoplasma bovis in Beef Cattle
August 2016 Authors: Eduardo Casas, Guohong Cai, Larry A. Kuehn, Karen B. Register, Tara G. McDaneld, John D. Neill Info: USDA scientists performed a longitudinal study of young cows to identify microRNAs linked to a serum antibody produced after exposure … more »
Posted in Citation
Tagged HiSeq, Illumina, microRNA, Pippin Prep, RNA sequencing
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Circulating Extracellular RNA Markers of Liver Regeneration
July 2016 Authors: Irene K. Yan, Xue Wang, Yan W. Asmann, Hiroaki Haga, Tushar Patel Info: Mayo Clinic researchers performed partial hepatectomies in mice and then monitored RNA activity in serum samples to find a signature associated with liver regeneration. … more »
Posted in Citation
Tagged cfRNA, Illumina, MiSeq, Pippin Prep, RNA sequencing
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Identification of Human Islet Amyloid Polypeptide as a BACE2 Substrate
February 2016 Authors: Ingrid C. Rulifson, Ping Cao, Li Miao, David Kopecky, Linda Huang, Ryan D. White, Kim Samayoa, Jonitha Gardner, Xiaosu Wu, Kui Chen, Trace Tsuruda, Oliver Homann, Helene Baribault, Harvey Yamane, Tim Carlson, Jed Wiltzius, Yang Li Info: … more »
Posted in Citation
Tagged HiSeq, Illumina, Pippin Prep, RNA sequencing
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Poster on Full-Length Transcript Sequencing Includes SageELF
We are pleased to report the first customer poster featuring the newest addition to our product lineup, the SageELF whole-sample fractionation tool. “Single Molecule, Real-Time Sequencing of Full-length cDNA Transcripts Uncovers Novel Alternatively Spliced Isoforms” comes from scientists at Pacific … more »
Posted in Blog
Tagged PacBio, RNA sequencing
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Simultaneous Rapid Sequencing of Multiple RNA Virus Genomes
March 2014 Authors: John D. Neill, Darrell O. Baylesb, and Julia F. Ridpatha Info: Researchers at the USDA in Ames, Iowa, apply NGS to simultaneously sequence ten genomes of archived viruses from a single pooled sample, with the goal of … more »
Posted in Citation
Tagged Ion Torrent, PGM, Pippin Prep, RNA sequencing
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Molecular indexing enables quantitative targeted RNA sequencing and reveals poor efficiencies in standard library preparations
January 2014 Authors: Glenn K. Fu, Weihong Xu, Julie Wilhelmy, Michael N. Mindrinos, Ronald W. Davis, Wenzhong Xiao, and Stephen P. A. Fodor Info: Scientists from Cellular Research and Stanford University describe a method for improving the use of RNA-seq … more »
Posted in Citation
Tagged Methods, Pippin Prep, RNA sequencing
Comments Off on Molecular indexing enables quantitative targeted RNA sequencing and reveals poor efficiencies in standard library preparations
A quantitative reference transcriptome for Nematostella vectensis early embryonic development: a pipeline for de novo assembly in emerging model systems
June 2013 Authors: Sarah Tulin, Derek Aguiar, Sorin Istrail, and Joel Smith Info: Scientists from the Marine Biological Laboratory and Brown University developed a new pipeline for de novo transcriptome assembly that can be used with organisms lacking a well-annotated … more »
Posted in Citation
Tagged Illumina, Pippin Prep, RNA sequencing, RNA-seq, ScriptSeq
Comments Off on A quantitative reference transcriptome for Nematostella vectensis early embryonic development: a pipeline for de novo assembly in emerging model systems