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Tag Archives: Illumina
Synthetic Spike-in Standards Improve Run-Specific Systematic Error Analysis for DNA and RNA Sequencing
July 2012 Authors: Justin M. Zook, Daniel Samarov, Jennifer McDaniel, Shurjo K. Sen, Marc Salit Info: New approach to discovery of systematic sequencing errors by use of spike in RNA or DNA control DNAs. Pippin Prep used for RNA-seq library … more »
Posted in Citation
Tagged DNA Sequencing, Illumina, Pippin Prep, Pippin System, RNA-seq
Comments Off on Synthetic Spike-in Standards Improve Run-Specific Systematic Error Analysis for DNA and RNA Sequencing
Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species
May 2012 Authors: Brant K. Peterson, Jesse N. Weber, Emily H. Kay, Heidi S. Fisher, Hopi E. Hoekstra Info: An NGS method that allows inexpensive HT genotyping at moderate depth without prior knowledge of any markers. A high impact paper. … more »
Posted in Citation
Tagged Featured, Illumina, Pippin Prep, RAD-seq
Comments Off on Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species
At Emory, Size Selection Saves Time for NGS Prep
At the genome center at Emory University, scientists credit the Pippin Prep with shaving almost a full day off the sample prep process for Illumina’s mate-pair library prep. Chad Haase, laboratory manager at the Emory GRA Genome Center, says that … more »
Posted in Blog
Tagged DNA Sequencing, Illumina, Mate-pair Sequencing, Pippin Prep
Comments Off on At Emory, Size Selection Saves Time for NGS Prep
Low Incidence of DNA Sequence Variation in Human Induced Pluripotent Stem Cells Generated by Nonintegrating Plasmid Expression
March 2012 Authors: Linzhao Cheng, Nancy F. Hansen, Ling Zhao, Yutao Du, Chunlin Zou, Frank X. Donovan, Bin-Kuan Chou, Guangyu Zhou, Shijie Li, Sarah N. Dowey, Zhaohui Ye, NISC Comparative Sequencing Program, Settara C. Chandrasekharappa, Huanming Yang, James C. Mullikin, … more »
Posted in Citation
Tagged DNA Sequencing, Illumina, Paired-end Sequencing, Pippin Prep, Pippin System
Comments Off on Low Incidence of DNA Sequence Variation in Human Induced Pluripotent Stem Cells Generated by Nonintegrating Plasmid Expression
Mutation discovery in mice by whole exome sequencing
December 2011 Authors: Heather Fairfield, Griffith J Gilbert, Mary Barter, Rebecca R Corrigan, Michelle Curtain, Yueming Ding, Mark D’Ascenzo, Daniel J Gerhardt, Chao He, Wenhui Huang, Todd Richmond, Lucy Rowe, Frank J Probst, David E Bergstrom, Stephen A Murray, Carol … more »
Posted in Citation
Tagged DNA Sequencing, Illumina, Paired-end Sequencing, Pippin Prep, Pippin System
Comments Off on Mutation discovery in mice by whole exome sequencing
SAGE SCIENCE SIGNS CO-MARKETING AGREEMENT WITH ILLUMINA TO AUTOMATE DNA SIZING STEPS IN NEXT-GEN SEQUENCING SAMPLE PREPARATION
Beverly, MA—October 21, 2010—Sage Science, Inc. (a privately-held, MA-based company) today announced that it has signed a co-marketing agreement with Illumina, Inc. (NASDAQ:ILMN). Illumina and Sage have agreed to co-market the Pippin Prep system in an effort to provide automated … more »
Posted in Press Release
Tagged Illumina, Pippin Prep
Comments Off on SAGE SCIENCE SIGNS CO-MARKETING AGREEMENT WITH ILLUMINA TO AUTOMATE DNA SIZING STEPS IN NEXT-GEN SEQUENCING SAMPLE PREPARATION